../../tmp/servers/virsirnadb/1283462893
Result for your query siRNA sequence
RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | Strain name | Start | Alignment | End | % Identity |
Query | virsi2020 | 1 | gcaattcattgagtatgct | 19 | |
M74568.1 | RSHSEQ Human respiratory syncytial virus nonstructural protein 1, nons | 106 | .................a. | 124 | 94 |
M74568.1 | RSHSEQ Human respiratory syncytial virus nonstructural protein 1, nons | 10280 | ___.........a.t..t. | 10265 | 68 |
M74568.1 | RSHSEQ Human respiratory syncytial virus nonstructural protein 1, nons | 12070 | _______..........__ | 12079 | 52 |
M74568.1 | RSHSEQ Human respiratory syncytial virus nonstructural protein 1, nons | 970 | __________......... | 962 | 47 |
M74568.1 | RSHSEQ Human respiratory syncytial virus nonstructural protein 1, nons | 7816 | __________......... | 7824 | 47 |
U63644.1 | HRU63644 Human respiratory syncytial virus, mutant cpts-248/404, compl | 106 | .................a. | 124 | 94 |
U63644.1 | HRU63644 Human respiratory syncytial virus, mutant cpts-248/404, compl | 10280 | ___.........a.t..t. | 10265 | 68 |
U63644.1 | HRU63644 Human respiratory syncytial virus, mutant cpts-248/404, compl | 12070 | _______..........__ | 12079 | 52 |
U63644.1 | HRU63644 Human respiratory syncytial virus, mutant cpts-248/404, compl | 970 | __________......... | 962 | 47 |
U63644.1 | HRU63644 Human respiratory syncytial virus, mutant cpts-248/404, compl | 7816 | __________......... | 7824 | 47 |
U39662.1 | HRU39662 Human respiratory syncytial virus S2, complete genome | 106 | .................a. | 124 | 94 |
U39662.1 | HRU39662 Human respiratory syncytial virus S2, complete genome | 10249 | ___.........a.t..t. | 10234 | 68 |
U39662.1 | HRU39662 Human respiratory syncytial virus S2, complete genome | 12039 | _______..........__ | 12048 | 52 |
U39662.1 | HRU39662 Human respiratory syncytial virus S2, complete genome | 9838 | ________.........t. | 9848 | 52 |
U50362.1 | HRU50362 Human respiratory syncytial virus, mutant cp-RSV, complete ge | 106 | .................a. | 124 | 94 |
U50362.1 | HRU50362 Human respiratory syncytial virus, mutant cp-RSV, complete ge | 10280 | ___.........a.t..t. | 10265 | 68 |
U50362.1 | HRU50362 Human respiratory syncytial virus, mutant cp-RSV, complete ge | 12070 | _______..........__ | 12079 | 52 |
U50362.1 | HRU50362 Human respiratory syncytial virus, mutant cp-RSV, complete ge | 970 | __________......... | 962 | 47 |
U50362.1 | HRU50362 Human respiratory syncytial virus, mutant cp-RSV, complete ge | 7816 | __________......... | 7824 | 47 |
U50363.1 | HRU50363 Human respiratory syncytial virus, mutant cpts-248, complete | 106 | .................a. | 124 | 94 |
U50363.1 | HRU50363 Human respiratory syncytial virus, mutant cpts-248, complete | 10280 | ___.........a.t..t. | 10265 | 68 |
U50363.1 | HRU50363 Human respiratory syncytial virus, mutant cpts-248, complete | 12070 | _______..........__ | 12079 | 52 |
U50363.1 | HRU50363 Human respiratory syncytial virus, mutant cpts-248, complete | 970 | __________......... | 962 | 47 |
U50363.1 | HRU50363 Human respiratory syncytial virus, mutant cpts-248, complete | 7816 | __________......... | 7824 | 47 |
AF035006.1 | Human respiratory syncytial virus, recombinant mutant rA2cp, complete | 106 | .................a. | 124 | 94 |
AF035006.1 | Human respiratory syncytial virus, recombinant mutant rA2cp, complete | 10281 | ___.........a.t..t. | 10266 | 68 |
AF035006.1 | Human respiratory syncytial virus, recombinant mutant rA2cp, complete | 12071 | _______..........__ | 12080 | 52 |
AF035006.1 | Human respiratory syncytial virus, recombinant mutant rA2cp, complete | 970 | __________......... | 962 | 47 |
AF035006.1 | Human respiratory syncytial virus, recombinant mutant rA2cp, complete | 7817 | __________......... | 7825 | 47 |
AY353550.1 | Human Respiratory syncytial virus 9320, complete genome | 106 | .............c...a. | 124 | 89 |
AY353550.1 | Human Respiratory syncytial virus 9320, complete genome | 1992 | .g..g..ta........._ | 2009 | 73 |
AY353550.1 | Human Respiratory syncytial virus 9320, complete genome | 10290 | ___.........a.t.___ | 10278 | 57 |
AY353550.1 | Human Respiratory syncytial virus 9320, complete genome | 8338 | .a.........________ | 8348 | 52 |
AY353550.1 | Human Respiratory syncytial virus 9320, complete genome | 11105 | .........__________ | 11113 | 47 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 106 | .......g.........a. | 124 | 89 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 10279 | ___.........a.t..t. | 10264 | 68 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 12069 | _______..........__ | 12078 | 52 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 9868 | ________.........t. | 9878 | 52 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 970 | __________......... | 962 | 47 |
AY911262.1 | Human respiratory syncytial virus strain ATCC VR-26, complete genome | 7815 | __________......... | 7823 | 47 |
AF013255.1 | Human respiratory syncytial virus mutant cp52, complete genome | 1994 | .g..g..ta........._ | 2011 | 73 |
AF013255.1 | Human respiratory syncytial virus mutant cp52, complete genome | 8999 | ___.........a.t.___ | 8987 | 57 |
AF013255.1 | Human respiratory syncytial virus mutant cp52, complete genome | 7047 | .a.........________ | 7057 | 52 |
NC_001781.1 | Human respiratory syncytial virus, complete genome | 1994 | .g..g..ta........._ | 2011 | 73 |
NC_001781.1 | Human respiratory syncytial virus, complete genome | 10291 | ___.........a.t.___ | 10279 | 57 |
NC_001781.1 | Human respiratory syncytial virus, complete genome | 8339 | .a.........________ | 8349 | 52 |